PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05245.1.g00020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CPP
Protein Properties Length: 363aa    MW: 39132.9 Da    PI: 10.0774
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05245.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR42.11.8e-13155192240
                             TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                                     +kk CnC++s+Clk+YCeCfa+g++C+  C+C +C+N+ 
  Zmw_sc05245.1.g00020.1.am.mkhc 155 KKKCCNCRNSRCLKLYCECFASGAYCDG-CNCINCFNNP 192
                                     799*************************.********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011144.0E-15154194IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163415.646155220IPR005172CRC domain
PfamPF036388.6E-10156191IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MAGKEPAGGG PHQRPPTPAV SSQPPVKKLV RQLDFNSAAM AGNPAMAAAA AAVSRALQPR  60
AAHVGLPHQQ HTRATVPLGV PQQMQHRGLP VLRPHQAVGH VPLPRMAVAV PVPQLRPTLV  120
QPVPRPPVSV PLSVKPESPN LRAKLYEGKD GTPTKKKCCN CRNSRCLKLY CECFASGAYC  180
DGCNCINCFN NPGNDVTRRE AIDATLERNP DAFRPKIGSS PHTNRNNNAM PDGSVPISQS  240
VHPPTLGPFK VTYRPLLADI VQPDDIKELC KLLVVVSGQA AKAYTDRKTQ EEKAAKTEDH  300
KPEERYSMAI KPEASAHLGQ VNGVSRVPYS KVDVPSVVQT FLQSSSSQPV TGHLDKRLKP  360
DKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232363.11e-100PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X3
RefseqXP_010232364.11e-100PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X4
RefseqXP_010232362.11e-100PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X2
RefseqXP_010232361.11e-100PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X1
TrEMBLQ94DS21e-105Q94DS2_ORYSJ; P0460E08.26 protein
STRINGBRADI2G50540.11e-100(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6231322